Hi Bob;
Ive done quite a lot of flanges in my lifetime and typically I dont use any wizard hole features when making the thru holes
I use wizard features on fancy schmancy holes like NPT or BSP or countersinks and counterbores
I just do the following:
Open a sketch, draw a bolt circle using construction line font and add the dimension for the bolt circle
Draw a construction at an angle to the vertical that intersects with the bolt circle
Dimension the angle
Then I use the endpoint of that construction line to draw a circle and dimension that circle the necessary clearance size for the bolt.
I next extrude cut that circle and pattern the resulting hole to match the required hole spec
Finally I adjust the angle to get the holes equally straddled about the vertical centerline.
I do it this way to match industry standard ways of specifying and measuring flanges.
Most vendor cut sheets give you bolt circle diameter, hole diameter and quantity of holes so its easiest if you make those the actual dimensions in your sketch
I you work in a welding shop they will also need the straddle center angle, because most flanges are installed that way
The X-Y dimension method is more used in a machine shop where you might be setting 0,0 and need the coordinates if machined holes for CNC tooling
If you have to use a hole feature, you can usually right click on its sketch and redo it in the manner above.
Hole features often have 2 sketches on for the location as described and another for the revolved shape of the hole.
Hope this helps
Adrian Dunevein
AAA Drafting Services