jobcanada,
Is this a primary-secondary pumping system (with separate pumps for circulating through the chillers) or one single loop?
Assuming you have a primary-secondary, I would take one of the air handlers, and install a 3-way valve. Pick a valve that will give you whatever minimum flow you're trying to achieve, and you're done, and you have no control system to worry about.
If your system is large and diverse enough and you have some year-round cooling loads, you probably will always acheive your minimum flow anyway. You might want to wait and see how the system operates before installing anything.
More importantly, you should make sure that you choose your method of VSD control carefully. Pick a couple of remote points in the system, and install differential pressure sensors between supply and return. Modulate the VSD to satisfy the differential setpoints of each of the zones.
---KenRad