If you are confident of plant operations, and the filters are all fitted well, and gasket seals at each filter element are not leaking, that doesnt leave many other possible suspects:
a)These level transmitters are external displacer type, so presume you've cross checked its readout against the LG for accuracy.
b)You say lube oil loss is 2litres/day, but how do you know it is through these filters and not at the compressor unit lube oil degasser vent? Do you have an oil/hydrocarbon separator in the lube oil circuit?
c) Has the downstream user confirmed this is lube oil carryover and not hydrocarbon condensate? There are many gas plants which unknowingly produce offspec high dewpoint sales gas because some of the separators in the dewpoint control unit have unacceptable liquid carryover into the gas stream ..
d) How is the pressure at these sales gas filters maintained at a constant 1200psig? Do you have a backpressure controller / control valve at the final plant exit to maintain this pressure? Low operating pressure = high velocity at these filters = high liquids carryover.
e) Believe pulsating flow is detrimental to the operation of all types of vapor / liquid separation devices, including coalescers, which would be applicable in this case with these Waukesha recips. If PALL say this is likely, did they apply a derate on the permissible gas flowrate for these filters?