I was curious if the NEC prohibited the transformer neutrals from be tied together on a common neutral bus.[/q]
The answer is Yes. For the reason I mentioned in my second paragraph of my earlier response. Plus there is no reasons to interconnect two separately derived system conductors unless they are being operated in parallel with a proper design.
I have done only data centers in last decade, and I understand your description, however you cannot interconnect the two neutrals in load centers (RDCs)as you describe. Why would you want to do that to begin with?
Isolation to ground at the RDC has no bearing. Both transformers are already grounded at their secondaries.
Rafiq Bulsara