Again, a flange may have a MAWP. When the program reports a flange's MAWP, it may associate the bolt's MAWP with that flange (in fact I dont know, as I dont know ASPEN BJac, but thats what I think). Have you read the manual, and contacted Aspen on this topic?
A bolt does however have a max allowable stress, and stress may be expressed in the same unit as MAWP (e.g. MPa), even though theyre 2 different things. I suggest you do some reading of ASME VIII-1 app 2 first.