Thanks for the input Double-Edge.
The image I provided might be causing some confusion and respecting the fact that I can't show my actual work, I simply grabbed this from the Y14.5-2018 standard as an example. But if you can imaging the thru hole being my tapped hole (1 of 3) and the Counter-bore being a v-groove (1 of 3) and those are both machined through a flexure (1 of 3) 120 degrees from one another around a fold mirror axis. The v-grooves need to be tightly toleranced in location and orientation. The tapped hole and flexure just need to be on center of each v-groove and both features are unrelated to the other 2 sets. My thought was to actually simplify the inspection by allowing a Gauge 'Plug' (Go No-Go) that can simply pickup the 3 features that are in-line to each other, and that can be done individually 3 times. If you take the image I posted as an example, you don't necessarily need to move the part to inspect the counterbores, put rather you could have a Gauge Plug that essentially looks like a featureless screw (shaft to pickup the MMC of the thru hole, and a larger diameter head that picks up the coaxial relationship and FoS of the of the counterbore at MMC. My functional gauge plug would be similar, but it would have a sphere to pickup the v-groove, a shaft protruding out to pick-up the Minor Dia of the tapped hole, and then 2 parallel plates to pickup the width and centering of the flexure. I think this is an interesting method of dimensioning because, if done right, could potentially ease the inspection process, loosen tolerances, and it also tells a story about the parts functional requirements by practically saying this feature is only related to this feature and does so very specifically.
All of that said, I'm also not sure this is what I will do. I could take advantage of default Simultaneous Requirements and simply reference the same datums, in the same order, with the same Material Boundary with individual FCF callouts for each feature. That will require a tightening of tolerances, makes tolerance stack-ups a bit more tricky, and it does not identify the functional relationships as clearly, but it is generally more understood and that is worth consideration. So far, everyone I've talked to about using the Individually method has never done it and isn't crazy about it. I will likely respect that even if I think this method makes sense and is under utilized, which makes this feedback meaningful. Thanks again.